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Hi again,
I would like to include indel calling to the process, there fore I added pinned to the timor-normal paired cancer tutorial. However, it freezes during execution with out error without any w…
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We have prepared a list of proposals for changes to the GO to be
discussed prior to and at the GO Content Meeting, to be held
November 15-16 at TIGR.
The proposals are uploaded as files attached to…
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positive regulation of DNA damage response, signal
transduction by p53 class mediator
or (preferably)
positive regulation of p53 induced by DNA damage response
--- Proposed Locations ----
PROCE…
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I am submitting an obo formatted file of the revision of the
immunology and response and detection terms (file is zipped). This is
close to the final form of the revision, and I invite all interest…
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Hi,
I added structural variant detection to the tumor/normal pipeline and then run initially with n=10,
here is the output below but run with n=1, any suggestions about how to improve the debugging of…
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Hi,all
I am beginer with SpeedSeq.I have 40 cancer-normal WGS and want to call somatic snps,but I don't konw how to use speedseq somatic exactly.
1.How to create a tumor or normal bam file from 40 WGS…
bioxu updated
8 years ago
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Hi
Today I am annotating ADIPOQ Q15848 with PMID:10604883 data.
Treatment with ADIPOQ before stimulation with TNF reduces the TNF enhanced adhesion of monocytes to aortic endothelial cells.
So I …
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Looks like vcf support has been added to Scalpel recently: http://sourceforge.net/p/scalpel/code/ci/master/tree/
Opening this ticket while I'm looking into testing Scalpel and integrating it within b…
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10.1371/journal.pone.0047867:
Video was already on Commons at
http://commons.wikimedia.org/wiki/File:Archer_fish_shooting_at_prey.ogv
(archived at http://www.webcitation.org/6C3frhrTq )
but the bot u…
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The reason for tihs issue is that while reorganizing the layout of one of our two clusters, I attempted to use a distributed FS to reduce the load on a single machine. The issue that emerged was that …