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Produce a heatmap of the UK to show prevalence of variants in different areas
You will need to obtain data of the prevalence of different variants for each area of the UK and plot this on a map. You …
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Title: Learning the language of viral evolution and escape
# General Information
## Please paste a link to the paper or a citation here:
Link: https://science.sciencemag.org/content/371/652…
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As discussed, it would be really useful to be able to compare (say) a ground truth tree sequence with unary-when-coalescent nodes left in, with the same version either inferred using tsinfer, or with …
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#### "Triple-dot" (`...`) sequences are useful for array indexing/subsetting. But comma-separated "Triple-dot" (`...`) sequences produce bizarre and unpredictable results:
```raku
~ % raku
Welcom…
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Thanks for your great work! I am a grad student in Anshul Kundaje's lab and would like to propose adding the dynseq track to IGV which we have discussed briefly with @jrobinso on some of the ENCODE ca…
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Hey there.
Getting an error on the last step in the medaka workflow
```
bcftools consensus -f PQPR059970.preconsensus.fasta PQPR059970.pass.vcf.gz -m PQPR059970.coverage_mask.txt -o PQPR059970.…
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Dear @torognes, are you planning to add the sintax classifier http://biorxiv.org/content/early/2016/09/09/074161?
Thank you,
Davide
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The vocabulary HGNC (Human Gene Nomenclature (European Bioinformatics Institute) is listed on the Athena vocabulary site https://athena.ohdsi.org/vocabulary/list as an optional download, but when sele…
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I'm using the current Tilix on Debian, which is 1.9.4.
I use a lot of different terminals, so I don't want to use color schemes features of terminals.
Instead I am used to set the color palette, t…
hg42 updated
11 months ago
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Check the assumption that all shared nodes have the same mutations. Can use a small nonWF sim to test that this error is thrown.
(site note: to do with with a nonWF sim, should split off a new sub…