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Thanks for developing so helpful tool !
I was trying to quantify signal at transposable elements from Pol2 ChIPseq and ATAC-seq.
I guess that TElocal can do this. However, I only used TElocal on R…
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There are several ncRNA terms that refer to specific RNA families and mirror the [Rfam](https://rfam.org) RNA family classification, for example:
- [OxyS_RNA](http://sequenceontology.org/browser/cu…
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Hi,
I got the following error message from kallisto quant, but kallisto seems to be on version 0.50.0 and it doesn't explain what those versions refer to.
```
[quant] fragment length distributio…
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RNA-Sequencing (RNA-Seq) is a popular method for determining the presence and quantity of RNA in biological samples. In this 3 hour workshop, we will use R to explore publicly-available RNA-Seq data f…
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# Data overlap
## Generate a `data overlap matrix`. Overlapping to the `ATAC-Seq differential accessible regions`
- [x] **ChIP-Seq:** `TRUE` or `FALSE` of there is an overlap between ATAC-Seq an…
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`Hi,`
I'm having another problem when plotting RNA velocity.
The following is my command:
```
cellDancer_df=cd.compute_cell_velocity(cellDancer_df=cellDancer_df, projection_neighbor_choice='gen…
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Grace au fichier rna de data gouv on pourrai avoir les noms par rna + un matching rna siren
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**Steps to Reproduce**
1. Switch to Macro mode
2. RNA >> open RNA builder
3. Select Preset >> "Duplicate and Edit" button several times.
![image](https://github.com/epam/ketcher/assets/161723514/8…
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