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Hey there,
I am reporting a problem with Biopython 1.70, Python version 3.6.4 on Linux-4.15.3-1-ARCH-x86_64-with-arch.
It appears that the nucleotide sequence is incorrectly parsed, when loading…
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Gold standard benchmarking datasets such as the GIAB/NIST NA12878 and the Illumina Platinum Genomes truth sets provide both a VCF containing the variant records themselves, plus a BED file of "high co…
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Dear all,
In the image I’ve attached, there are some SNPs which are confusing to me (the “convoluted” ones).
The paths seems to indicate that those are inversions. Indeed, some paths enters the…
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## System information
- Apalache version: `0.45.4 | build: 99508e4` (latest release)
- OS: Linux, Ubuntu 24.04 (latest release)
- JDK version [e.g. OpenJDK 0.8.0]: openjdk 21.0.4
## Descriptio…
lucab updated
1 month ago
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On first download DROID's 'maximum bytes to scan' value is set at 65536 bytes, limiting DROID to scan the first and last 64k of all given files. This is a setting that's been in place for a very long …
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The existing `bidib_serial_port_write` function (`bidib_transmission_serial_port.c` L121) writes one byte only. However, in `bidib_flush_impl` (`bidib_transmission_send.c` L84), we have a range of the…
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I don't know if this is of any use to you, but these are my notes on the _DEC Technical_ character set, and the mappings (or lack of mappings) to Unicode. You're welcome to use any bits that you think…
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From branch 35 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1502
JN.1.4+T18453C+G28209C,del21653_21655(Orf8:E106Q, S:S31-)+G22599C(S:R346T)
Brazil just uploads a lot of seq…
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It would be nice to have an explicit buzzer output. The should probably be an output type on the mixer table and then can be sourced from an explicit buzzer output UAVO. It would be nice to have a lis…
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Here is a strange case of a missing gnomAD variant, 17-41228120-T-C. It appears in the gnomAD browser (https://gnomad.broadinstitute.org/variant/17-41228120-T-C?dataset=gnomad_r2_1_non_cancer), but n…