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Hello,
I am working on developing a Slivar pipeline to run parallel to our lab's Seqr pipeline, and one remaining area of discrepancy is our SpliceAI annotations. Would it be possible to obtain the…
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I've testing the code and basically I have this output of the query molecules but the answer is quite strange :
here the smiles in the test folder
![image](https://github.com/Qiong-Yang/FastEI/as…
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Hi,
I just tried the function in silico PCR on my merged database.
At the begining, it was working well with the first in silico PCR and the primers were found in many sequences but then i had so…
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### Summary
We have partnered with [BioModels](https://www.ebi.ac.uk/biomodels/) at [EMBL-EBI](https://www.ebi.ac.uk/) (Hinxton) to explore potential ways to incorporate Ersilia's models into well-es…
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Hi,
The multi-species nucleotide transformer model appears to be very promising! I'm curious, do you have any plans to pre-train the nucleotide transformer on plant species?
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Hello,
I am looking to have Smart-seq3 added as a Smart-like scRNA-seq library preparation protocol.
This is an existing synonym that was mistakenly listed under [Smart-3seq](http://www.ebi.ac.u…
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Dear @vdemichev,
First of all, thank you very much for the great software! I have used DiaNN before with its GUI on a Windows machine. However, I need to set up a linux based pipeline now and am ru…
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Hello,
I have installed CRABS through conda
so I have download sequences for the ITS-2 region from ncbi with the following command:
crabs db_download --source ncbi --database nucleotide --que…
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Kathryn Russell reported that we didn't give a warning/danger thresholds for negative Pangolin scores (for splice loss).
Could we add a second set of thresholds for Pangolin?
![image](https://…
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