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Hi everyone! I am a PhD candidate and a very beginner of spatial transcriptomics. Please help me...
I have CosMx dataset of 3 different samples (S0, S1, and S2) and try to analyze and compare them …
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I'm getting this error when trying to run uncalled4 4.1.0 on RNA data.
```
Auto-detected flowcell='FLO-MIN106' kit='SQK-RNA002'
/usr/include/c++/8/valarray:583: _Tp& st…
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What is the selection criteria for GO annotations provided by UniProt? Are they supposed to provide all GO annotations from a UniProt entry because I've noticed the GO annotations in an UniProt entry …
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Add these to the pipeline:
RNA-SeQC: https://software.broadinstitute.org/cancer/cga/rnaseqc_run
DNA: Picard alignment summary
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hi,
I have a sample, and this sample has rnaseq data and isoseq data
braker.pl --genome=genome.fasta --prot_seq pro.fasta --bam=rnaseq.bam --bam=iso_seq.bam --threads 32
Is this command runni…
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![image](https://github.com/wildfirechat/uni-h5-chat/assets/10606844/414f9242-7d4e-4775-9880-07fa58bee6e9)
机型:华为RNA-AN00
浏览器:QQ浏览器
聊天无法显示输入栏,往上滑也滑不动,无法显示底部的输入栏。
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Hi,
I'm encountering an issue while mapping some samples using STAR. The process begins normally and successfully maps the first sample, but then the subsequent samples are ignored. When I attempt to…
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I am trying to run a grch37 ref for a rnafuion/nf-core pipeline and it only fails at fusioninspector, help me to rectify and solve the issue
log:
Oct-04 20:49:49.064 [Task monitor] DEBUG next…
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I have snRNA-seq dataset from literature called sc in S4 Seurat.
I converted it to SingleCellExperiment using this function:
sc.sce data->listData-> logcounts
logcounts is a S4 [2000x220170]…