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Hi! I have been using Kaiju for a while, and now I am interested in filtering fungal reads. For this, I used the Kaiju app in KBase and compared the results using two different databases: NCBI BLAST n…
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Galaxy server : usegalaxy.eu
Tool version : Galaxy Version 0.1.1
(1) History which contains execution of SearchGUI+Peptide Shaker with the **comprehensive** database (reference+variants+indel+alt sp…
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**[Tomas-Mrazek](https://jira.spring.io/secure/ViewProfile.jspa?name=tomas-mrazek)** opened **[DATAJDBC-299](https://jira.spring.io/browse/DATAJDBC-299?redirect=false)** and commented
Oracle 11g does…
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Dear all,
I want to use hhblits to build my own database(1,040,000seqs). I followed the tutorial "Building customized databases", and the second step is to build an MSA with HHblits for each sequence…
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Hello, thank you for providing such a useful tool. I installed EDTA using conda, and when running the test data, I encountered the following ERROR:
`mamba create -n EDTA
conda activate EDTA
mamba…
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[CDR3序列.xlsx](https://github.com/liulab-dfci/TRUST4/files/13934536/CDR3.xlsx)
Thanks to the developers of the tool for facilitating us to analyze the immune repertoire data. I used the trust-smarts…
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Hello,
I am trying to run the following code found in your tutorial:
```
library(Tax4Fun2)
physeq %>%
refseq() %>%
Biostrings::writeXStringSet("D:/Home/cobertrand/Desktop/asv.fa…
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### Odoo Version
- [ ] 15.0
- [ ] 16.0
- [X] 17.0
- [ ] Other (specify)
### Steps to Reproduce
I encountered an error when upgrading the database.
This error is because the `fname` does not exist …
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Create PlantUML diagrams for
- [x] packages
- [x] use cases
- [ ] sequences
- [ ] database
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**Gene Detection Output Terms**
- ROBOT table new term requests (basic template, data item specific template unavailable at this time)
- `GenEpiO ID (temporary)` and `Curation Notes` annotations are…