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During a quick look through the models I found that H2O is annotated as hydroxide additionally, among other things. The question here is whether this is correct or this should be fixed.
Problem can b…
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## Minimal code example to reproduce the problem
It looks like for some file formats the subsystem field might not be parsed. I've spotted this from two different models in SBML format, so I checke…
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Would it be possible to get permissino to put the BiGG IDs for metabolites in (the CC0-licensed) [Wikidata](http://wikidata.org)? That would allow Wikidata to link out to the BiGG database. I'm sure I…
egonw updated
5 years ago
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The following packages do not seem to have publicly available sources, and the latest release (cached on the package servers) do not have any associated license file in them. I believe therefore that …
aviks updated
2 weeks ago
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Dear author,
I installed locally from the latest Github version and am trying to run carveme through the metaGEM pipeline. When calling carve, I have to specify the full python path (/usr4/spclpgm/…
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Hi Professor.
I'm a newbie and I'm trying to construct a community metabolic model using carveme in order to analyze the metabolic characteristics of the community using smetana solver.
I am encount…
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yep, we need that, hope that medium will also work
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Hi,
Another issue i've come across.
Image at: http://imgur.com/gN09q
The first time I typed '.bigg test' was what made the talker talk to myself.
The second time I typed '.bigg £test'
This caused…
ashak updated
3 years ago
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Chemical formula errors:
- Many chemical formulae in BiGG start with the prefix `['`and end with the suffix `']`. I have trimmed those thrings, but maybe these have some relevance? Should those be rem…
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[Marketplace](https://marketplace.xbox.com/en-au/Product/The-BIGS-2/66acd000-77fe-1000-9115-d80254540830)
Tested on https://github.com/xenia-project/xenia/commit/b1d3fd2
# Issues:
Crashes…