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API URL: https://biothings.ncats.io/multiomics_clinicaltrials_kp
Github URL: https://github.com/multiomicsKP/clinical_trials_kp
Git branch/commit: https://github.com/multiomicsKP/clinical_trials_kp/…
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[EDIT: this was the original motivation. The next post explains addressing this and more using a new API-level x-bte field]
This is a less-important + probably-easy part of "x-bte refactoring". Pre…
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UI team is eager to work with the edge-level pathway information being returned by BTE via PFOCR as a KP. Currently, we just have a flat list of `values` including the figureUrl and PMCID. Ideally, t…
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In https://github.com/biothings/pending.api/issues/62, we are loading GTRx, a database of diseases and their corresponding treatments. However, we [decided](https://github.com/biothings/pending.api/is…
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In https://github.com/biothings/biothings_explorer/issues/569, we refactored the semmeddb document structure (currently available in https://biothings.ncats.io/semmeddb2). In the original semmeddb AP…
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In https://github.com/biothings/BioThings_Explorer_TRAPI/issues/569, we created the semmeddb2 API that aggregates records by unique subject-predicate-object triples, and computes `pmid_count` and `pre…
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I'm not sure if this is a BTE issue or not but when I run the query, MVP1 What may treat Bethlem Myopathy, i get dimethyl sulfoxide twice, in in the UI
https://ui.test.transltr.io/main/results?l=Be…
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The OpenFDA API may be a useful source of relationships between compounds and other entities (including protein targets). (**EDIT 2020-10-28**: separated out the issue of compound properties from Ope…
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It looks like the [OpenTargets](https://platform-docs.opentargets.org/data-access) API that BTE was ingesting is no longer available.
Instead, there's a [GraphQL API](https://platform-docs.opentar…
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Two points.
1. Can we improve the formatting of the gene aliases we get from MyGene.info. Currently looks like this:
2. It would be useful to add info from Entrez Gene's "Phenotypes" section.…