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Hi, I am working with the Visium HD colorectal cancer dataset. I have annotated a mask on the microscopic image with qupath and have it as a geoJSON file.
Could I please get instructions/ links to t…
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## **Objective**: To replicate the BioMuta pipeline to generate a dataset as close as possible to the current BioMuta dataset.
**Presentation Shared with meeting notes**: https://docs.google.com/pr…
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- [x] #120
- [x] test set level table
- [x] gene level cancer type heatmap
- [x] patient specific bar graph stratified by cancer type
![image](https://github.com/jyaacoub/MutDTA/assets/50300488/…
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* Name of dataset: StructSeg
* URL of dataset: https://structseg2019.grand-challenge.org/Home/
* License of dataset: Unknown
* Short description of dataset and use case(s):
The dataset contains t…
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I am a newcomer to the field and have recently been reviewing the literature on pySCENIC. I noticed that the tutorials provided on GitHub, which include datasets for PBMC and cancer, seem to be focuse…
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Robel can you tell what the different values are for the below two fields and how can they be used for various datasets, in integration status in the dataset-masterlist.json?
"integration_status"…
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**Describe the problem**
To enable cancer research, I would like to suggest including functionalities to work with cancer cell line information in TDC. In DepMap, there are updates in newer DepMap re…
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# [Project Addition]: Breast Cancer Detection using DL - with Web App
## Description
**Aim of the project**: The aim of this project is to develop a Breast Cancer Detection system using Deep Lea…
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Dear Sir or Madam, Hello:
First of all, please allow me to express my most sincere apologies to you for my sudden interruption which may have interrupted your valuable work or research. My name is Zh…
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For some discussion up to now, see #4 discussion, but wanted to transition to an issue so we can complete the PR.
This project started out as a way to address the desire for [cancerinfocus](https:…