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I have a gff3 file that I downloaded from the Microscope Annotation platform. This is how the file looks:
```
##gff-version 3
##sequence-region TQC00001.1 1 2035761
TQC00010.1 annotation remark 1 …
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Hi there,
I recently use Deepsignal to detect DNA methylation and received the result as seen below.
```
1 387268 - 4855350 079a30f7-9f4c-4a7a-ad5b-39e3ef61530b t 0.565757 …
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**Submitting author:** @TomKellyGenetics (S. Thomas Kelly)
**Repository:** https://github.com/TomKellyGenetics/graphsim
**Version:** v1.0.0-joss
**Editor:** @majensen
**Reviewer:** @rcannood, @corybru…
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Hi @HajkD,
I keep getting this error in the filtering step just before usearch clustering.
Which file is failing to be parsed at this stage?
```
Input: /disk2/nguinkal/Zander_Project/pipelines/L…
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hi @ralowe @al-mcintyre Thanks for share the project , nice work.
I use mCaller detect m6A meth susses, but when I compared the result with tombo, they are so big big big big big difference，the sam…
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**Submitting author:** @TomKellyGenetics (S. Thomas Kelly)
**Repository:** https://github.com/TomKellyGenetics/graphsim
**Version:** 0.1.2
**Editor:** @majensen
**Reviewers:** @rcannood, @corybrunson
…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/whirlsyu/EnMCB
Confirm the following by editing e…
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Published: https://doi.org/10.1186/s13059-017-1189-z
Preprint: https://dx.doi.org/10.1101/055715
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as identified in https://github.com/edamontology/edamontology/issues/292#issuecomment-314162572
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SuRE-seq, the previous dataset I was working with, is fundamentally a promoter assay, and therefore it was hard to find many biologically relevant features other than GC content (which affects nucleos…