-
This is an example `.slurm` script I use for my job array. Assuming that I have a list of hundreds of command lines that can be run in parallel (i.e., they're independent of each others). All command …
-
Hi, I've referenced previous resolved issue #14 to cpan DB_File using:
```
export LDFLAGS="-L/gpfs2/home/tchen/homebrew/Cellar/berkeley-db@5/5.3.28_1/lib"
export CPPFLAGS="-I/gpfs2/home/tchen/homeb…
-
For a while I've been playing around with [this prototype repo](https://github.com/jacobtomlinson/dask-runners) which implements Dask Runners for HPC systems. I'm motivated to reduce the fragmentation…
-
See proposed structure: https://github.com/rcgsheffield/sheffield_hpc/issues/2040
See also notes from knowledge share session: https://docs.google.com/document/d/14TD733joWRGJ7RkWEY_zaB3E7TZTwVOktq…
-
Need to have a script that will tell us if we missed any steps for species which should successfully complete the workflow. Need to:
- [x] Establish criteria for which species should complete the w…
-
### My Question is...
I am trying to install the gmxMMPBSA in the HPC. I follow the https://valdes-tresanco-ms.github.io/gmx_MMPBSA/dev/installation/#installing-gmx_mmpbsa-v15x step by step. Then I…
-
### Steps to reproduce
```
[hpcadmin@ukvmlx-head-01 GDAL-3.9.0_gcc-10.2.0]$ spack install gdal@3.9.0 %gcc@10.2.0 arch=linux-centos7-x86_64
==> Error: Spack concretizer internal error. Please subm…
-
Hi!
Very excited to try this out. FYI it would be very nice to have an option for the user to set the number of threads used by this program/dependencies. I was trying to test it on an HPC and it k…
-
I've had the latest 0.9.0 installed for 24 hours now and everything seems to be working correctly, however my reputation continues to sit at 1.
Thoughts?
reputationd log for last 7 hours. https:…
-
In HPC a common standard is to use `slurm` to "provision" test workers, especially for highly parallelized or specific hardware requirements. I got a suggestion for having this kind of `provision` ste…