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Hello,
I am trying to perform label-free quantification with LFQ-MBR on mzML converted files. I am getting an error regarding FDR threshold.
Would you have any idea how to fix this issue ? I have …
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[log_2024-05-14_11-54-23.txt](https://github.com/Nesvilab/FragPipe/files/15318874/log_2024-05-14_11-54-23.txt)
Hello,
I am trying to perform label-free quantification with LFQ-MBR on mzML conv…
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Typeclass objects offer dynamic (i.e. run-time and open modularity1) polymorphism by binding the typeclass bound to the static (compile-time) type of the reference and tagging the data type instances …
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Hi, I'm trying to run Fragpipe on headless mode using Ubuntu, but I'm facing an error with the database Fasta file "ERROR - FASTA file path is empty or the file is corrupted". I've downloaded the fast…
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### Summary
I forked the NiPype repo and followed the requirement of running `make check-before-commit` before submitting a PR but I got the output below ending with an error.
I am in a conda en…
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Sorry if it was discussed before, after scanning the issues I didn't find anything on the subject.
The motivation comes from the last addition: the spec for `chainRec` which I find hard to understan…
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This came up on Slack today, what do we fill in when an attribute is a log-transform of another? The consensus was to create a custom unit called `log{unit}`, e.g., `meter` -> `logmeter` that is dimen…
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during the stabilization of TAITs (type alias impl trait) in https://github.com/rust-lang/rust/issues/63063#issuecomment-1386064436 a concern was raised: it's not obvious for the compiler (and IDEs), …
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I wonder whether at
https://github.com/clulab/eidos/blob/8758be8a5860fc3404f1d6f66b5095a161a6d87c/src/main/scala/org/clulab/wm/eidos/groundings/grounders/SRLCompositionalGrounder.scala#L285
the …