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The following error occurs when I use the 'trans_diff' function for lefse analysis
![image](https://github.com/user-attachments/assets/6ce101b1-dbf0-43fa-bd03-b1c454ca95f0)
The colnames of sample_ta…
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good morning :)
how to solve the issue of the overlapping of the labels in the cladogram? I can't find any option to change the place of the label on the cladogram itself to be on different levels le…
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Hi,
For the posthoc_test() function, it might be interesting to add the option to specify the taxonomic rank for summarization.
I would like to compare the markers obtained with "run_lefse" at t…
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Dear Chi,
I've encountered this error message when analyzing my dataset using the trans_diff function for LEfSe.
> dataset dataset
microtable-class object:
sample_table have 361 rows and 17 col…
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**Is your feature request related to a problem? Please describe.**
Handling of metadata is inconsistent and redundant across MMEDS. There should be a single Metadata class that handles all functions …
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```
The pipeline ran after removing the samples which was resulting in error
executor > local (6046)
[a2/6ffd4c] process > QC (69) [100%] 73 of 73 ✔
[c6/b1e07e] process >…
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I encountered a problem with a code:
```
res.aldex
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Microbiome analysis reveals gut microbiota alteration of early-weaned Yimeng black goats with the effect of milk replacer and age
https://pubmed.ncbi.nlm.nih.gov/33789672/
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Hello,
When I run concoct I get the following error:
`import vbgmm
ImportError: libgsl.so.25: cannot open shared object file: No such file or directory`
The current fix I found is to enter m…
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Termen `tilfeldig gang` har MSC 60.66. Dette er et gamelt nummer, nytt nummer er 60G50. Muligens finnes det grunn til å registrere begge?