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#277 added the ``thapbi_pict ena-submit`` command for use with the TSV template for mapping your FASTQ files to your samples. Prior to that you must define the samples, and ideally follow one of the m…
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Especially `config/curated_slot_notes_by_text_mining.tsv`
```make
text_mining_results/mixs_v6_repaired_term_title_token_matrix.tsv: config/curated_slot_notes_by_text_mining.tsv \
generated_schema…
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**Is your feature request related to a problem? Please describe.**
For the MIxS documentation, we would like to have content negotiation for each term page (and checklist and package pages), i.e. if …
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## Implementation:
- currently [printing to console in a test](https://github.com/microbiomedata/DataHarmonizer/blob/24e90b4541e639a7872ef5b1d0092925448efe1c/tests/test_sntc.py#L234-L271)
- manually…
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- Note that these revert away from NCBI's structured comment names in several places, presumably to keep the SCN lengths under 20 characters.
- See https://www.ncbi.nlm.nih.gov/biosample/docs/attribu…
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| Field | Value |
| ----- | ----- |
| subject_id | http://data.ggbn.org/schemas/ggbn/terms/volume |
| subject_definition | Volume of sample |
| subject_usage_notes | this element can be used for …
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- data_harmonizer/schemas/mixs_6_2_rc.json
- schema-derivatives/mixs_6_2_rc.json
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MIxS v6.2.0 is based on the following input: https://github.com/GenomicsStandardsConsortium/mixs/raw/issue-610-temp-mixs-xlsx-home/mixs/excel/mixs_v6.xlsx
See the mixs6.2_release_candidate repo's […
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## Global
```yaml
mims_soil_set:
name: mims_soil_set
from_schema: https://github.com/turbomam/mixs-subset-examples-first/tree/main/src/mixs_subset_examples_first
```
## Database sl…
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Before concluding the work of the DwC-MIxS TG, we have to decide on a license for our mapping outputs.
Potential licenses:
- [CC BY](https://creativecommons.org/licenses/by/4.0/) This license allo…