-
Update `monarch_context.jsonld` to match with Dipper's CURIE yaml.
@kshefchek
-
yaml output by ontogpt contained a \x0004 character, which seems to be an end of transmission in unicode, see
https://en.wikipedia.org/wiki/End-of-Transmission_character
The following fixes it:
h…
-
example: http://dev.monarchinitiative.org/PATO:0000001
I'm not sure if this is a backend problem (something about the hierarchy code is silly, like making one request per subclass entity), or if it…
-
I wondered if there was any information/publication on the development or validation of the Monarch text annotator?
many thanks
Alisdair McNeill
-
NCBI is the authority, we should resolve there (just as PR resolves to the PRO website, GO to AmiGO, HPO to HPO/Monarch, etc).
E.g.
https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=9606
-
Looking around the new site, the top level has:
"About" (Citing, licensing, sources, and other info)
Which takes us to http://monarchinitiative.org/about
Here we have "Sources" and "Terms of Us…
-
I'm encountering ICD-11 disease identifiers which are not normalizable currently. Is there any ongoing effort to create these mappings in Babel? I noticed that there is a makefile for MONDO ingest tha…
-
User Shammah Arellano posted this https://www.youtube.com/watch?v=QWmJroBWaek
Investigating
-
A few languages use indented blocks for structure, and thus don't always have end markers that could be directly matched against. In particular, YAML presents multi-line string literals (scalars in YA…
-
# Step 1: Monarch Ontology Review: SIGNATURE
Because the diff is huge, to big to be proberly reviewed, I will portion it for you @cmungall @kshefchek
This here is a breakdown of the big blocks …