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In discussing the utility of the NeuroDocker minification process for another project, a prospective alternative utilisation came to mind.
Currently, what happens for a given external dependency (e…
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10 applications to test the new build system:
- [x] https://github.com/NeuroDesk/neurocontainers/issues/155
- [x] https://github.com/NeuroDesk/neurocontainers/issues/121
- [ ] https://github.com/…
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Hi! I'm sorry to bothor you! I've run participant level and the get these three .csv .
I wonder the meaning of them, does weights.csv contains a fiber-weight matrix, which shape is n*n, n is the num…
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Redirecting discussion from #8.
> ```bash
> "dwibiascorrect: [ERROR] N4BiasFieldCorrection -d 3 -i mean_bzero.nii -w mask.nii -o [corrected.nii,init_bias.nii] -s 4 -b [100,3] -c [1000,0.0] (ants.p…
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Hello
I am trying to convert Connectome to a glass brain like this figure:
I have so…
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Given that the software is openly broadcast as being capable of supporting compilation of external projects making use of the API, ideally prior to tagging 3.1 we should have a template demonstrating …
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With *MRtrix3* there's been a few requests over the years to have, for streamlines propagated bidirectionally from the seed point, knowledge of which vertex in the output streamline corresponds to the…
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It seems that, on specific system environments, `mrview` displays overlay image voxels with value 1 as transparent when the image datatype is either uint32 or int16. This only happens when the image i…
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Was trying to test #2370 but this is probably unrelated. Not sure if it's my setup but it appears that on intel macOS, mrview does not work
```
xhost +local:root
docker run --rm -it -v /tmp/.X11-…
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To be ported to the *MRtrix3* documentation:
https://jdtournier.github.io/cmdline-tutorial/index.html
Probably as a stand-alone page; the current "Command-line usage" page would then be more "ad…