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Zarr sharding has been merged into the Python Zarr v3 code: https://github.com/zarr-developers/zarr-python/pull/1111#event-8421675745
To improve on the concerns here: https://github.com/fractal-ana…
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This is a tracking issue for some of the current issues when having a SpatialImage of circa >10 channels in SpatialData:
- [ ] **Vizarr, Avivator, Vitessce fail when loading SpatialImage**
- T…
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Dear all,
I would like to ask you help in interpreting the OME Zarr data of this dataset:
https://uk1s3.embassy.ebi.ac.uk/idr/zarr/v0.4/idr0062A/6001240.zarr
(https://hms-dbmi.github.io/vizarr/?s…
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I understand that the name OME-NGFF was a great choice for rallying the community around a new standardized, chunked, cloud-native image format. However, it is quite unspecific and will not age well. …
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For DANDI we are considering to implement custom support for zarr "filesets" versioning.
There is an experimental webdav which is reverse proxied by apache at is https://dandi.centerforopenneuroscien…
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Hello,
The dependency solver seems to go on an infinite loop when trying to add `ome-zarr` to a poetry project.
Can be reproduced even with just ome-zarr as the only dependency:
```
alik@AFI…
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On idr0125-pilot, going to test import of METADATA.ome.xml and then use mkngff to replace the fileset with full NGFF plate mounted on s3.
```
sudo cp idr0125/SQ00015207__2016-04-24T05_39_26-Meas…
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## 🐛 Bug
For a while, I've observed when I zoom into `4495402.zarr` off SSD with octree it gets slower the more you zoom. I assumed it was something with the octree code. But these traces show it's…
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Thanks for providing this great plugin!
We have been exploring storing and reading OME-Zarr data in [Arraylake](https://docs.earthmover.io/). For our application, it's not possible to just pass an …