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Currently, name alignments are published in tables. Tables are easy to process, but may be hard to interpret as a whole.
Idea is to create a visual representations graph (node-edge, network) ? to c…
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### Author(s) of proposal
Ran Wei
### Name of taxon
Cornopteris, Pseudathyrium
### Rank of taxon
Genus
### Approximate number of species affected
1
### Description of change
…
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### Author(s) of proposal
Ran Wei
### Name of taxon
Anisocampium
### Rank of taxon
Genus
### Approximate number of species affected
_No response_
### Description of change
R…
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What are the arguments that we should know for the function phylo? In addition, what cases require an unrooted and rooted tree?
aat52 updated
2 years ago
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Hi,
In `iqtree`, it is possible to perform multiple tests of branch support, each one being assigned to the same branch delimited by `/`. As far as I can tell, biophylo cannot parse these trees.…
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decide on whether we want to distribute them in an extra document or have them on the webpage
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There are existing resources that we can point to as starting point:
- [Alli's Epi Handbook](https://alliblk.github.io/genepi-book/)
- [Nextstrain VEME tutorial](https://github.com/blab/veme-2022) …
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Hi Sir,
Thank you very much for this package!
I recently bumped into a difficulty in gene tree simulation using Phybase.
It failed to simulate gene trees for the third tree in the file but it …
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Hi, liang:
After done the simulation of gene trees using Phybase, i want do a correlation analyses between simulated genetrees and empirical gene trees , like this:
![图片](https://user-images.githubu…
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(Python?) script to take Newick string and spit out edges