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**Describe the Bug**
Hello. I'm still new to this field, so I'm studying it little by little and referring to it often.The reason I'm commenting like this is because I had a problem with the error ba…
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Good day,
I tried installing coremicrobiome (in a Python 3.6 environment) on Ubuntu 16.04 via `conda install -c richrr q2-coremicrobiome`. Unfortunately, the installation fails, as shown in the outp…
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This was originally asked here
https://github.com/biocore/scikit-bio/issues/1582
There are two details that confuse me regarding using ilr and a custom basis argument.
I understand that gneiss …
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Hi,
SEPP is now a dependency for installing the latest version of QIIME2 via conda (v2019.10, https://data.qiime2.org/distro/core/qiime2-2019.10-py36-linux-conda.yml).
The bioconda recipe for SEPP…
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Hello there,
I would like to know if it is possible to use the ASV tables obtained through the DADA2 pipeline in R (https://benjjneb.github.io/dada2/tutorial_1_8.html) as input for the qiime2 conver…
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I'd like to add this to my github.com/jolespin/veba software package under the mapping module. Currently, I can only add packages from conda because the environments are so complex and there are many …
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**Bug Description**
When classifying a 23M feature set, and separately a 20M subset, it was observed that the number of reported Archaea differed by two orders of magnitude (4k in 23M and 400k in 20M…
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**Improvement Description**
It should be possible to download the QIIME compatible version of Silva and construct reference phylogeny and alignment for SEPP to enable 18S analyses.
**Questions**
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This has been holding up a 2.1.16 release. No time to do it right now, and this would represent at least 1.5 week delay. Deferring a fix to later.