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I have been trying to assemble a 10Mb genome with uncorrected nanopore data (3-4 chromosomes expected). We have a lot of data, is that the reason Flye fails at the end?
[2019-06-22 11:00:05] INFO: …
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I love what you did with this project and I am working on a T1200xe which is slightly different so I made a comment on your YouTube video but just in case you didn't get it or if it got moderated, ill…
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Hi,
RepeatMasker (`4.0.9`) ends with `FATAL ERROR: RepeatMasker giving up.`
I've launched RepeatMasker on a file that holds a larger number of repeats.
I've noticed that the TRF `4.0.9` comma…
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Hi,
Thank you for developing the excellent `straglr` tool. I've read your paper "Straglr: discovering and genotyping tandem repeat expansions using whole genome long-read sequences". I'm still confus…
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I've written a wrapper function to calculate consensus sequences from POA alignments using rust-bio. Some sets of sequences panic where I wouldn't expect them too; for example, see the following:
`…
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is there any way to schedule OSC messages with a sample-accurate offset between them?
it's possible in NRT mode. here is a proof of concept where i take two cosine waves of exactly 3 periods and co…
nhthn updated
6 years ago
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Hello! I thank you for the great tool that you've created. It's been really helpful. However, I have questions regarding multiallelic short tandem repeats on ExpansionHunter. I found that EH doesn't s…
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Using image: `quay.io/biocontainers/shovill:1.1.0--0`
Run with default options
Error message:
```
[shovill] Correcting errors in spades.fasta
[shovill] Running: pilon --genome spades.fasta…
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https://mp.weixin.qq.com/s/Mk4cKYirjj88BFbp66Ni2Q
ixxmu updated
8 months ago