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Hello,
For the MF refactoring of transporters:
We have two groups of terms that represent the same function, ATPase-coupled transporter activity, but with slightly different mechanisms: describe…
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I believe this chemical is unsatisfiable because it is both a role and a chemical. Shouldn't it has_role siderophore? Thanks for taking a look.
ukemi updated
4 years ago
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we had a few tickets and the annotation is a bit messy so checking and improving it.
need to add to this story....
**1) TRANSCRIPTIONAL REGULATION**
**HIGH IRON**
Fep1 transcriptionally ne…
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I have attached a spreadsheet detailing a dozen wrong annotations that have been imported into EcoCyc for BtuB. The source of the incorrect terms relating to siderophore and enterobactin transport is …
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Merge 'GO:0052099 acquisition by symbiont of nutrients from host via siderophores' (2 annotations)
'GO:0044847 iron acquisition by symbiont from host' (0 annotations)
since siderophores transport ir…
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```
[Term]
id: GO:1903981
name: enterobactin binding
namespace: molecular_function
def: "Interacting selectively and non-covalently with enterobactin." [GO_REF:0000067, GOC:mr, GOC:TermGenie, P…
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we had a few tickets and the annotation is a bit messy so checking and improving it.
need to add to this story....
**1) TRANSCRIPTIONAL REGULATION**
HIGH IRON
Fep1 transcriptionally negati…
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The definition of 'receptor activity' "Combining with an extracellular or intracellular messenger to initiate a change in cell activity. " is almost the same as 'signaling receptor activity' "Receivin…
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Hello,
There are some errors in the annotations of 'GO:0033212 iron import into cell' and children. Possibly this is because the term used to be labeled 'iron assimilation', and several mechanisms…