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- Export
- Loupe
- results/cloupe.cloupe
- Cellxgene
- results/cellxgene.h5ad
- Seurat
- results/seurat.rds
- results/seurat_data/
ktrns updated
8 months ago
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Context:
@seve Lasso isn’t resetting on failure to close the lasso
https://chanzuckerbergteam.slack.com/archives/C06FM5ZQE3Y/p1710966938965819
Repro:
1. Visit https://cellxgene.dev.single-cell.czi…
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Context:
Repro:
1. Visit https://cellxgene.dev.single-cell.czi.technology/e/spatial-4.cxg/?spatial=true
2. After the embedding is loaded, we expect the image layer to be automatically turned on, but …
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Thoughts, implementations and advice welcome!
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Context:
User Story 1:
As a data consumer, I want to view my gene expression data (scatterplot) overlaid with a microscopy image so that I can put my observations into biological context.
DoD:
1. Pro…
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I have an empty dataframe containing dictionary/enum attributes. When a value filter / query condition is applied to it, it triggers an internal Arrow error. It should return an empty result. All w…
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## Motivation
When datasets are withdrawn by submitters, we need the ability to signal that the dataset is "gone" (HTTP 410) rather than not found (HTTP 404).
## Approach
We can leverage Lambda@Edge …
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With values yes/no depending on if the source dataset has a DOI.
Group with "in cellxgene" filter.
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With values yes/no depending if the source dataset has a project id.
Group with "is in cellxgene" filter.
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## Describe the bug
Info for many datasets aren't available in the cellxgene_census API.
## To Reproduce
```{r}
census_datasets