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@danbri and @alex-jansen:
https://github.com/schemaorg/schemaorg/issues/2915 added https://schema.org/iso6523Code (see that issue and https://en.wikipedia.org/wiki/ISO/IEC_6523 for a description).
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The two EBI resources [IntAct](https://www.ebi.ac.uk/intact) and [ComplexPortal](https://www.ebi.ac.uk/complexportal) contain curated data on experimentally observed interactions between proteins.
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Hello!
Thank you for such important and useful software. Unfortunately, there was error during the similarity search step. The full code is below:
*****
> setwd("/media/sf_Space/Genes/Phylostratr/…
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Hi,
Can I use Kraken for the classification of my assembled data ? Are there special options for that ?
Thank you very much in advance,
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Hi,
It's my first time analysing metagenomics from a shotgun experiment but before to post this issue I tried some strategies to overcome the topic described below.
I would like to construct a phy…
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NCBI Taxonomy may not be sufficient for many working in this domain.
@pyilmaz [Pelin Yilmaz](http://orcid.org/0000-0003-4724-323X) suggests examining the [Integrated Taxonomic Information Service](htt…
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Hey I'm running species primer on a server. I've gotten it to work in the past but they did an OS update so I had to reinstall. I've got to use the apptainer tool. Basically I create an overlay that i…
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Hi,
I'm trying to use aggregate on initial access to a document, I have encrypted the subdocument. Error: UnhandledPromiseRejectionWarning: Error: Authentication failed: Only some authenticated fie…
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Hello,
I used NCBi's Refseq 16S sequences to build and test an index with centrifuge (default options). I am using the release 1.0.3 installed via conda.
I am getting this error when running the…
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Hi,
I was using the script to build the silva database:
kraken2-build --db path/2/db --special silva
and I realize that you convert the 'domain' rank from SILVA to 'superkingdom' in th…