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**Describe the bug**
In the symbiont-associated package in consideration for v6.0, the use of the term "symbiont" appears to be unclear and inconsistent.
@ramonawalls @pyilmaz @lschriml @only1ch…
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Hi,
I wanted to run the CAP on a test PE read dataset. Following the instructions listed on the [GitHub page](https://github.com/MetaSUB/MetaSUB_CAP#running-with-docker), I executed the following c…
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Hey, could you please double-check on your function plot_core?
I tried to do :
det
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Hi. I am trying to install Powmic on my MAC (Mojave 10.14), but cannot get the package installed and the dependency rMAGMA on the same R version. I can install rMAGMA with R 3.6 but not powmic, and vi…
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I have a request for some code. Basically, I want some way to highlight intrapersonal variation through time. I know the within versus between unifrac distances says that variability within an individ…
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https://spaam-community.slack.com/archives/C0183TC8B0R/p1667987904955569
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hi!
I am trying to use MIDAS to simulate a dataset based on a published dataset, but ran into an error when running the line `fitted_c0b0 = Midas.modify(fitted,
lib.siz…
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Hello,
I would like to use selbal yo analyse my microbiome data. I created a dataset with only only the taxa of interest (only taxa present in more than 20% of the samples have been included), a colu…
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Create Function to add given transformation to all altExps / ranks at once, or at least provide an example in OMA/mia.
This is handy also since methods like `agglomerateFeaturesByRank` or `splitByR…
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Hi,
I am executing the portal_client tool (with my iHMP username and password) to download the files using a manifest file as follows:
portal_client -m hmp_cart_e0473170e2.tsv --endpoint-priority FA…