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**Is your feature request related to a problem? Please describe.**
Existing Helix constraint info is old. Update with Nicole Lake's new data.
**Describe the solution you'd like**
Use new values …
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Hi,
I want to perform multiple in silico PCR's using Dicey. But every time I start a new search it seems like it has to load the full reference genome. Is there a more efficient way to load the ref…
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Hi,
I have been trying to U-markers specific for RRBS using
`wgbstools find_markers --betas *hg38.beta -b RRBS_regions_hg38 -g Group_file --only_hypo`
but I was running into this error: https:/…
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Kia ora GJ - just checking in about steps 5 onwards - these don't seem to work on the MitoFish database because step 5 doesn't seem to work (generates a blank input.tsv, presumably because the databas…
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I was still using V1.4.3 and when i used freyja covariants everything seemed to work except the heat map was slightly different. Now, Im using V1.4.5 and im getting this error when i use the followin…
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_This checklist was developed by Alina Renz during her PhD thesis._
- [x] 1. **Decide for an organism of interest.** Denote name and strain.
- [x] Check whether the strain is available on the …
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$ biscuit align -MC -k 12 -t 6 -p hg19.fa BST_50_1_CRC_S4_R1_R2.fastq > BST_50_1_CRC_S4.bam
[M::bwa_idx_load_from_disk] read 0 ALT contigs
[M::process] read 428404 sequences (60000236 bp)...
[bseq…
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### My Question is...
I am doing the decomposition analysis, but it only returns the FINAL_DECOMP_MMPBSA.dat, I didn’t get FINAL_DECOMP_MMPBSA.csv. And dec_verbose=3, I don’t know how to read the fil…
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Hi,
I have run SpeedPPI on some downloaded fasta files, but would like to know how to interpret the results. So far the pdockq is very low for the ones I have tried. One pairing has known interacti…
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Hello,
I just made a record and uploaded all 8,000+ files (29Gb total). However every time I try to publish it I get the following error:
## Error
```
Error: lexical error: invalid char in…