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E.g. tot_org_carb in the soil package should be mapped to http://purl.obolibrary.org/obo/ENVO_09000008
Should this be specified outside, e.g. in SSSOM format, as separate mapping files?
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https://genomicsstandardsconsortium.github.io/mixs-6-2-for-merge/
- soil
- mims
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Currently, the spreadsheets that are downloadable from the gensc.org website *do not* clearly instruct users to supply the ID (in CURIE format), just the term label.
This is very risky as only the ID…
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On the MIXS-RDF call today, questions about versioning came up.
If we adopt semantic versioning (i.e. Major.Minor.Patch), we need to have clear criteria on when each number is updated.
So, start…
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The makefile is still set up to generate new yaml files from the google sheets. As such, it removes all the existing yaml files upon `make all`. Since we now have a final version of MIxS 6, we should …
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In what ways can we use tags to organize old versions?
what do established users expect?
legacy versions as folders in main branch of current repo?
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I think @ramonawalls said she needs to share a Microsoft Excel representation of MIxS 6 with NCBI.
I tried to generate the LinkML Excel artifact, but that is just a collection of sheets, each of wh…
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**Ontologies for bulk DNA samples**
I am creating a metadata template for Natural England's eDNA work. To make it as user-friendly as possible, I have been creating drop down list for env_broad_sca…
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CC @jzrapp (perhaps link to the Cryo spreadsheet you've developed?)
For parameter groups that are repeated across multiple environmental packages (e.g. sample logistics)
These support packages (…
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see also
- GenomicsStandardsConsortium/mixs#685
- GenomicsStandardsConsortium/mixs#714