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Hi Martinos,
I'm interested in potentially making use of one of your libraries, and, in my searching, I've come across the repositories for both swimd and edlib. These seem like they have very sim…
rob-p updated
10 years ago
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By comparison with swipe I observed that the scores computed by swimd are often incorrect. Since I did a comparison between swipe and ssearch sometimes ago, I trust the scores of swipe.
Compare for i…
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Given that bower 1.2.7 (the current release) doesn't unpack font files inside a zip archive, refer to the individual font files rather than downloading them as an archive.
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I've been seeing segfault crashes when I try to run an OCR program on an x86 machine with one of the mach_n.xml machine models in the smith-waterman benchmark. The crash occurs at the very end of exe…
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Good work on the library, I think it can be a valuable addition which will make it easy to add fast smith waterman alignments to analysis pipelines. However, the lack of attribution to Heng Li in thi…
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我这里有一个[图](http://i.imgur.com/gNUI1zt.png), 里面我写的是
```
算法包括 Smith-Waterman 算法 \cite{foo}
```
结果导致中英文之间的空隙看着不太对, 不知道这个能不能改?
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This may be application specific. For debug builds, I get the stack traces, but not for release. This is for our smp_smith_waterman application on a single core:
```
[17:04:47]:wash@lyra00:/home/wash…
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I have come across an error while attempting to run EMIRGE (listed below) does anyone know the possible cause? Thanks!
Traceback (most recent call last):
File "/work/kgwin1/packages/python/bin/emir…
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In smith-waterman the start site for cutting substrings is past the end of the string. This seems to be a problem with the variable `current_i` which has a final value of 1059.
`thrown --> basic_st…
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HI,
I have tried different cuda packages from nvidia websites (http://www.nvidia.com/object/bio_info_life_sciences.html) for bioinformatics simulations. CUDA-BLASTP won't work even if I succeed with …