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mengyao
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Complete-Striped-Smith-Waterman-Library
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Segmentation Fault encountered while running ssw_test
#90
troyeeee
opened
11 months ago
0
avx support
#89
HatakeKakaxi
opened
1 year ago
1
missing the begin of the alignments in the output
#88
SyedKumailHussainNaqvi
closed
2 days ago
2
Get top k result
#87
ManlioWu
closed
1 year ago
0
Please expose s_align.flag in the C++ wrapper
#86
marcelm
closed
1 year ago
2
why local alignment like Smith-Waterman not always symmetric?
#85
rocke2020
closed
1 year ago
2
Remove -rdynamic to allow building on Mac
#84
mr-c
closed
1 year ago
1
Fix mismerge from 49f04c87256d5a1fdb31cf426355a36103e284a7
#83
cbrueffer
closed
2 years ago
1
No libssw.so after executing 'make' in the src folder
#82
mcolic
closed
2 years ago
5
Is it possible to run on aarch64 platform?
#81
pplab
closed
2 years ago
1
incorrect alignment
#80
boristim66
closed
2 years ago
5
What is dRc in pyssw.py?
#79
kojix2
closed
2 years ago
1
Fix Back Trace Error in Alignment
#78
evolvedmicrobe
closed
2 years ago
2
segmentation fault (core dumped) when running pyssw.py
#77
MohdKhairulNizam
closed
2 years ago
1
segfaults with linear gap penalties
#76
stuckyb
closed
2 years ago
3
gap extension penalty is ignored if extension penalty > opening penalty
#75
stuckyb
closed
2 years ago
1
A problem about OS
#74
RingoSong
closed
4 years ago
0
Maximum length constraint
#73
anands-repo
closed
2 years ago
0
Please tag your releases
#72
tillea
closed
2 years ago
0
Discrepancy between C implementation and Python wrapper
#71
jjtapia
closed
2 years ago
0
Segmentation fault in rare cases
#70
mkirsche
closed
2 years ago
3
enable building on non SSE2 CPUs
#69
mr-c
closed
2 years ago
2
Contribution: SSE2 fallbacks for NEON (arm Cortex-A8+ including all RaspberryPIs), SSE, MMX, pure source
#68
mr-c
closed
2 years ago
0
Respect predefined CFLAGS and LDFLAGS
#67
landesfeind
closed
2 years ago
1
Core dumps in multicore environment
#66
andreirajkovic
closed
2 years ago
9
Make the case work where the user gives an explicit path to libssw.so
#65
cbrueffer
closed
2 years ago
2
Modify reverse complement base error
#64
friend1ws
closed
2 years ago
1
SSW fails to align if read and reference are switched
#63
vishnubob
opened
5 years ago
1
Fix operation with custom weight matrices
#62
cbrueffer
closed
2 years ago
1
Wrong protein alignment but correct score
#61
martin-steinegger
closed
2 years ago
1
Making this SSW implementation compatible with HHBlits
#60
stigvp
closed
5 years ago
0
Case with different alignment for plus/plus vs. minus/minus
#59
mathog
closed
6 years ago
7
tag a new release?
#58
notestaff
closed
2 years ago
0
how can I avoid doing reverse complement alignments?
#57
juancresc
closed
2 years ago
0
not seeing target_begin in blast output in python
#56
juancresc
closed
2 years ago
0
ssw-py installation error on linux
#55
javh
closed
2 years ago
0
what should I do if I don't want to alignment result with soft clip sequence("S")?
#54
ydLiu-HIT
closed
2 years ago
2
Bug for using unsigned int
#53
anirbannag
closed
2 years ago
0
readme format fixes
#52
nanxstats
closed
6 years ago
1
Comments Causing Confusion
#51
spikeliu
closed
2 years ago
1
problem while running make
#50
lfaino
closed
2 years ago
1
SegFault in Banded_SW when band_width is large
#49
bnbowman
closed
2 years ago
4
Fix buffer overflow in main.c
#48
ttasa
closed
2 years ago
2
error in the code
#47
lfaino
closed
2 years ago
0
Fix a bug caused by undefined 'sTarget' by replacing it with args.target
#46
zhaoyanswill
closed
7 years ago
2
`sTarget` undefined in pyssw.py
#45
paultsw
closed
7 years ago
1
Wrong intrinsic in ssw.c
#44
xiaona12138
closed
2 years ago
0
Add an Example of running SSW by java
#43
xubo245
closed
2 years ago
1
SEQ and QUAL have different lengths
#42
sdwfrost
closed
2 years ago
3
Inconsistent cigar and cigar_string in the C++ wrapper when -O3 is used
#41
bowhan
closed
7 years ago
1
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