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Hello,
I installed the **documentation branch** locally on one OSX and one Linux machine, and both have the following bug when using hicPlotTADs:
```
hicPlotTADs --help
Traceback (most recent …
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Installed v2.0 via
pip install git+https://github.com/deeptools/HiCExplorer@2.0.1-bugfix
I get the following error every time I run any of the commands. The 1.8v seems to be running smoothly.
T…
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Hi All
First, thank you very much for creating a web based tool so we can visualize our tracks on it. It is awesome.
However, I have been struggling to visualize my data.
I have followed the sugges…
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I noticed that a `.h` format is used. I have the raw bin files, how should I change it to the format pyGenomeTracks require?
```
Bin1 Bin2 Bin3 Bin4 Bin5 Bin6
7.85957 4.80329 11.4766 9.57416 4.52…
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Hi,
Many thanks for adding Hi-C support. I also deal with chromHMM state data.
can you please add visualizing epilogos?
https://epilogos.altiusinstitute.org/
https://github.com/Altius/epilogo…
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For some reason, the parameters are no longer rendering properly on read the docs. I recall seeing them when I looked locally, so perhaps there's an incorrect setting somewhere.
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Hi, I upgraded PGT to the master branch and now can't import it in python:
```
ImportError Traceback (most recent call last)
in ()
29 import _mysql
30 imp…
Phlya updated
6 years ago
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Feature request of @DonStephano.
To compare different matrices (datasets) better with hicPlotViewpoint, it should be possible to open n matrices at once. Each dataset is plotted with a different colo…
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This is a proposal. Feedback is encouraged.
I'd like to update the [infrastructure we've been using](https://github.com/galaxyproject/galaxy-hub/blob/master/CONTRIBUTING.md#public-galaxy-server-me…
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Hello,
I checked Travis CI building of the documentation branch and I saw that the build is failing only in python 3.6 at the test_hicAggregateContacts_3d step, you can check the error messages her…