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Hi,
I am doing a really small local assembly and noticed that the program gets stuck when I specify -t 1, and will run if I choose any other value of -t.
For example
```
wtdbg2 -i group.0/WH.re…
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Hi,
I am assembling several closely related draft genomes with masurca v3.6.2 (_not_ beta) based on illumina PE-only libs. Most assemblies finish without problems but one assembly fails to create o…
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Hi,
I've been running this assembly for well over a month now, and it crashed in the bogart phase of the assembly stage - please help! I've attempted to restart after crash and it reported the sam…
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Hi,
I was using KMC (3.0.0) for producing kmers of the unitig files (generated by [BCALM](https://github.com/GATB/bcalm)). The union of the databases produced a smaller resulting data-base.
Is it…
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May be I am working with an older version of canu as explained in [this](https://github.com/marbl/canu/issues/1011) earlier post. I tried running the assembly with both fastq file (from pacbio sequel …
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in spacegraphcats, we are consuming the output of your excellent tool and doing (or attempting to do) Clever Graph Things with it. (thank you for bcalm!) however, we are running into a problem that in…
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Hi
I had previously submitted an issue (#231), we have a large amount of data, almost 1TB, and our machine has about 512 GB of available memory, we used abyss in a command like this:
```
abyss…
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Hello everyone,
I used BCALM recently to build the compacted de Bruijn graph of a set of reads (k=31) and I think some unitigs in the output are not compacted correctly (maybe you can correct me on…
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Hi all,
I am using canu for the first time with the objective to assemble genomes from a metagenomic sample using Nanopore data. I have searched which parameters can be modified to achieve metageno…
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Since the **abyss-pe** has been run, the first command, `ABYSS` is run and has repeatedly happend that its state has been remained on `D` state, shown in the table of `htop` command.
Is it normal…