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```
docker run -ti --rm bids/afni_proc /bids_dataset /outputs participant --participant_label 01 --afni_proc '-subj_id {subj_id} -script proc.bids -scr_overwrite -out_dir {{out_dir}} -blocks tshift v…
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Single sessions dataset https://13-113127138-gh.circle-artifacts.com/0/home/ubuntu/outputs1/reports/sub-01_individual.html
Two session dataset https://13-113127138-gh.circle-artifacts.com/0/home/ub…
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All BIDS Apps implement the following compulsory command line options:
```app_name ```
Currently DPARSF is missing support for . Since right now it can only support participant level analyses …
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Hi all, I am getting the following error when I try to create a Singularity image using the following command. Any ideas why I am getting this error. I tried creating images for other apps (like CPAC)…
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Analysis level (third positional argument) is compulsory for all BIDS Apps even if they implement only one. In such case `participant` level should be used. More info at http://journals.plos.org/plosc…
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I converted the recently acquired fMRI/DTI/T1/T2/TOPUP data set into BIDS format. The images were acquired on a GE 3T MR 750 scanner with standard product sequences. The set appears to pass the valida…
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Hi,
Not sure where to ask this question...
I've been working on this app, and I had to update the bids-validator. Unfortunately now the test data is not compatible anymore with the validator (the…
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To allow BIDS Apps to parallelize over participants (remember that the input directory is the root of the dataset - not a single subject) each app need to support `--participant_label` command line ar…
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There is a weird connectivity issue that prevents the tests to run correctly. Namely download of http://lab.rfmri.org/sites/default/files/DPABI/DPARSF/DPARSFA_run_StandAlone_Linux.zip times out. Each …
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Keeping the temporary conversion folders out of the final BIDS source tree avoids validation errors. Ultimate goal is to handle dependencies in the conversion in the same way as make to handle the add…