issues
search
jmtyszka
/
bidskit
Utility functions for working with DICOM and BIDS neuroimaging data
MIT License
61
stars
41
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Error "No DICOM header information found in"
#132
adamculbreth
closed
2 weeks ago
3
Blip up/down for multi-echo
#131
zhengchencai
opened
3 months ago
0
Unclear specifications/ lack of examples of "Protocol_Translator.json" file
#130
ruben-stanford
opened
6 months ago
0
Unable to run bidskit - "TypeError: Expected maxsize to be an integer or None"
#129
ruben-stanford
opened
6 months ago
3
Files are overwritten on the second pass
#128
gauvinalexandre
opened
11 months ago
1
update Dockerfile to ubuntu:22.04 and related dependencies
#127
LixiangXu
closed
1 year ago
1
125 session flag
#126
jmtyszka
closed
1 year ago
0
session flag
#125
trevorbryanjackson
closed
1 year ago
0
Added access to a dcm2niix flag for ignoring certain images
#124
vnckppl
closed
11 months ago
1
Cannot convert Tilted CT Scan
#123
gauvinalexandre
opened
1 year ago
0
Cannot debug bidskit
#122
gauvinalexandre
opened
1 year ago
0
IntendedFor fields with incorrect slash when running in Windows
#121
alexsayal
opened
1 year ago
0
Acquisition suffix is duplicated when multiple runs
#120
gauvinalexandre
closed
1 year ago
5
Question about data structuring prior to running BIDSKIT
#119
ChristineFarrugia
opened
1 year ago
0
Error when using --no-sessions option and only one subject is converted
#118
gauvinalexandre
closed
1 year ago
2
Second pass issue
#117
CatalinaTLl
opened
1 year ago
1
Not anonymizing
#116
CatalinaTLl
opened
1 year ago
1
Read-the-Docs page is an empty stub
#115
dkp
opened
1 year ago
0
Second pass error : KeyError: 'ScanningSequence'
#114
elPreeto
opened
1 year ago
3
.bval and .bvec export depends on dwi filename
#113
davidrs06
opened
1 year ago
2
'SerDesc' key error
#112
ChristineFarrugia
closed
1 year ago
4
Second pass error
#111
hbaagil
closed
1 year ago
6
Switched to BIDS compliant templates for top-level files like README.md
#110
jmtyszka
closed
2 years ago
0
default readme in BIDS dataset after conversion
#109
Remi-Gau
closed
2 years ago
3
Development
#108
jmtyszka
closed
2 years ago
0
BIDS validation error for fieldmaps after conversion
#107
zhengchencai
closed
2 years ago
16
Illegal characters not stripped in BIDS filename key values with --auto
#106
jmtyszka
closed
2 years ago
1
Uncompressed but gz extension
#105
jmtyszka
closed
2 years ago
1
New 'auto' feature was on by default
#104
alexsayal
closed
2 years ago
1
Update fmaps.py
#103
alexsayal
closed
2 years ago
0
JSON files for magnitude images
#102
alexsayal
closed
2 years ago
1
Development
#101
jmtyszka
closed
2 years ago
0
Documentation for Injecting New Subjects into BIDS Directory
#100
claytonjschneider
closed
2 years ago
4
Fixed bug following : https://github.com/jmtyszka/bidskit/issues/72
#99
AsliErdemli
closed
2 years ago
1
--bind-fmaps not yet set up to work with --no-sessions
#98
sarahoh
closed
2 years ago
6
Adding flexibility to --bind-fmaps
#97
sarahoh
opened
2 years ago
0
TypeError: can only concatenate list (not "str") to list
#96
jawaltz
closed
2 years ago
6
adding an option to check Protocol_Translator.json
#95
sarahoh
opened
2 years ago
0
Pin pybids version to 0.12.4 for now.
#94
jmtyszka
closed
2 years ago
0
Development
#93
jmtyszka
closed
2 years ago
0
Implement Support for Scans.tsv
#92
claytonjschneider
opened
2 years ago
0
Development pull
#91
jmtyszka
closed
2 years ago
0
Adding key to structural scan filenames to indicate bias correction
#90
sarahoh
closed
2 years ago
2
RPE image IntendedFor correcting DWI: IntendedFor field does not populate
#89
dkp
closed
2 years ago
3
Remove zero-pad from run number
#88
alexsayal
closed
2 years ago
1
Can we anonymize data while converting?
#87
zhengchencai
closed
2 years ago
1
Issue with 'Intended for' field
#86
tstoica
closed
2 years ago
3
Installation told me to ask for help?
#85
katedamme
closed
2 years ago
1
--bind_fmaps flag is misidentified in --help menu
#84
davekahn
closed
2 years ago
1
Compatibility with pybids 0.13.x
#83
jmtyszka
closed
2 years ago
0
Next