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### ALTERNATE REALITY GAME
A virtual treasure hunt. Bunch of "academic clues" will lead to a conclusion. Participants can make teams of x members (5>=x>=3). First team to reach end wins
Things t…
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## Description
A user reported having issues with `rpy2` installation "in Linux systems". No further details have been reported, so we need to investigate what is going on, reinstall it on our own …
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As the title suggests `LazyRegressor` cannot be imported.
My environment (macOS, pyenv & virtualenv):
```
❯ python -V
Python 3.12.2
❯ pip list
Package Version
------------…
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Hello. Your code **dataset.py** shows the process of building your data. However, you don't seem to have given a simple example to show temp_seq, temp_dnase and temp_labels. e.g. what kind of informat…
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I used the test code from the README as follows, and encountered a TypeError:
```
$ python3 predict.py -m models/kidney_1_1_CodonBert_model_20230726_320_model_param.pt -f data/example_data/protein…
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Would be great if this package was available via conda-forge: https://github.com/conda-forge/staged-recipes/issues/26891
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## Describe the issue
The issue here seems to be that the VEP (Variant Effect Predictor) tool is unable to locate and load the required plugin, specifically dbNSFP4.1. The error message indicates tha…
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When I run gaftools stat to get statistics on my gaf file, it gives me this error and I get the impression that the problem is in the code and there's nothing I can do about it :
Traceback (most r…
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## Describe the issue
Hi. I am currently using VEP v111.0 to annotate my vcf files. When I use --offline mode and provided the synonyms file, errors shows up and some of the chromosomes do not overla…
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When generating dbNSFP ALL VCF, error append due to huge data.
Add memory limit (increase) to solve the issue.
> Error:
```
[E::hts_open_format] Failed to open file "/Users/lebechea/howard/data…