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I encountered a problem where one sample from sample_table had two runs: one for paired-end and second for single-end sequencing and received following error.
```
(databio) cgf8xr@cphg-fqvt2j3:~/dat…
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Je ne sais pas à quoi pourrait servir les données pour le moment, mais EN ALERTE m'a envoyé les liens suivants :
RSS : http://rss.naad-adna.pelmorex.com/
Socket TCP : http://streaming.naad-adna.pe…
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Add DNA damage manipulation options:
- mapDamage2 rescale
- pmdtools filter
- bamUtils trimbam
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Hi,
I am trying to run schmutzi.pl after contDeam.pl and contDeam works however I keep getting errors from schmutzi.
contDeam.pl --library double --out outputdir/sample.bam refs/human_MT.fa bam…
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When using the Download Asset as shown in the /samples/Sample.CLI project (which is using the `GetAsync(string key, List acceptEncodings)` of the AssetCanister) I only get the bytes of the first chunk…
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Hi. Thanks for the nice software. I have 2 queries.
1. Is there a way to ignore C->T and G->A SNPs in the tool's prediction? That will be invaluable for ancient DNA.
2. Is there a way to run this …
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This issue was created automatically with bugzilla2github
# Bugzilla Bug 393
Date: 2007-05-12T14:15:13+02:00
From: Trond Trosterud <>
To: Thomas Omma <>
CC: per-eric.kuoljok, sjur.n.mo…
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The crash is the same with llvm 17 and llvm 18.
The output looks like
```
clang-tidy: /.../llvm-v17.0.6d1rh74_lnx86/llvm-project/clang/lib/Basic/SourceManager.cpp:868: clang::FileID clang::Source…
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Add option to pass argument "--dedup" to fastp, in order to activate deduplication of reads. This is important both to not waste computational resources and to get a result in which the coverage is in…
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Right now the workflow (due to aDNA traditions) is SE oriented. Typically users have PE data. The step of merging overlapping PE reads is not currently implemented (because in Anders' project all fast…