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First thank you for this nice and clean implementation!
I have created a small repo https://github.com/jarjuk/yolov3-tf2-training documenting, how I have Dockerized your implementation (marcus200…
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@davidbenjamin We might be able to share some code with contamination calculation, etc. Tangentially related, we also should unify the pileup-based tools at some point. Low priority, we can discuss …
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Hi, Illumina discontinued the earlier version of the EPIC array. Can you suggest a way to use RnBeads with EPIC v2.0 data?
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As noted by Uwe Ligges:
```
--install-args='--configure-args=--disable-cxx11'
works on Solaris, but please better configure-test this, since our users
on other Unix systems may not know that arg is…
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Dear sciCNV developers,
I have 2 questions about sciCNV regarding control cell selection and multiple baseline feature.
Firstly, I would like to ask if gene expression data from control cells of…
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Dear Davide,
Thanks for your great work of VISOR!
We used visor to simulate WGS data in bam format to test if our CNV detection method works good. Now we want to predict the CNV prediction accura…
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https://ming-lian.github.io/2019/08/19/Bioinfo-ML-Club-6th/
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VR needs to have a path for representing translocations.
Allele is currently defined as a contiguous sequence change at a single location. Translocations and junctions are unlikely to fit in that m…
reece updated
8 months ago
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hi~ sir：
my bams all are more than 30X wiht B37。
Is AmpliconArchitect very slow when run on such large bam？
Waiting for your reply，thanks。
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I noticed that AA can work with tumor-only WGS data since it was tested on the cell line data. I am just wondering what would be the benefits if giving with paired normal WGS as well.