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### Project short name:
MultimodalSquamousCarcinoma
### Primary Wrangler:
Ida
### Secondary Wrangler:
### Associated files
* Google Drive: [folder](https://drive.google.com/drive/folders/1fm0TgR…
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As a TL I would to check the report consistency, identify and flag inconsistencies so that we can improve confidence in the report.
**Acceptance Criteria**
- [ ] Identify report rows where the m…
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Core features:
- [x] #28
- [x] #42
- [x] #12
- [x] #30
___
## **CRISPR screen assays**
Irrespective of the CRISPR screen platform used upstream, there are various experimental assays. For…
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Despite being told that this wasn't important or possible to add forwarding information for deleted identifiers when reported it, PubMed now addresses this issue by providing forwarding links. This is…
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- [x] Discuss problem definition with @nick-youngblut
- [x] Perform exploratory and test data analysis on existing datasets
- [This repo](https://github.com/abearab/ScreenPro-Benchmarking)
- [x] …
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From the file in issue #7 [MorphMap_gene_gene_scoring_data_with_CRISPR.xlsx](https://github.com/broadinstitute/2023_12_JUMP_data_only_vignettes/files/13844874/MorphMap_gene_gene_scoring_data_with_CRI…
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Hello,
I was attempting to use the WGS-whole-region-deleted branch of of CRISPResso2 because I have some cas12-edit nanopore amplicon reads which are 1000bp in length and have frequent 150bp deleti…
mbosm updated
1 month ago
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This SEP proposes a set of terminology and practices for representing genetic parts and functional devices at various stages of design, synthesis, and assembly. These practices are intended to represe…
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Hello!
I have successfully ran the program, but when I try to upload the Mapping_sorted.bam file into IGV, it asks for the index file ".bam.bai" file which is not there. When I try the sam file in…
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**Anna Greka** - Anne emailed (who works on ion channels) to see if she knows someone to talk with - Dec 15 https://mail.google.com/mail/u/0/#sent/KtbxLzfphpSXKvqjLksXdBkZFbLTKPBNnB
**Eitan Hoch** …