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The Swiss-Prot format "swiss" contains database cross-references to other databases. Currently SeqIO stores these in the dbxrefs list in the resulting SeqRecord. During parsing all of these cross-refe…
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The goal, here, is to increase exploitation by advertising PaNET as widely as is reasonable.
I reached out to Oonagh Mannix (from HMC), who was kind enough to provide a list of possible catalogues …
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The API provides both PEM and x509, the naming of this routine is a slightly unclear on which file is expected. Based on the name I thought it would want me to provide the x509, not the .pem. Thanks.
…
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This is similar than issue #26, but I am openong a new issue in case.
We are running some tests on TESK (https://github.com/EMBL-EBI-TSI/TESK), this one fails:
```
/usr/local/bin/cwl-tes --tes…
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Steps to reproduce:
1. Go to Ingest UI
2. Select a submission with `Archiving` status
3. Edit one of the biomaterial and remove the value from the `INSDC sample accession` field
4. Save the biomateri…
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Desired flow
1. Go to EMBL landing page
2. Connect with a group or person
2a. Select one of the domains the team works in
3. View a list of all related training, events, research, services, news
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NIAID noted some results that are publications rather than datasets that can be analyzed, like this one: https://data-staging.niaid.nih.gov/portal/resources/?id=OMICSDI_S-EPMC7363771
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Echoes: https://gitlab.ebi.ac.uk/emblorg/backlog/issues/259
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Dear all,
I think that adding a EMBL parser would be useful to deal with data stored in ENA. I think that I could use `skbio.io.format.genbank` and `skbio.io.format.tests.test_genbank` as a model to…
bunop updated
7 years ago
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**Describe the bug**
The geo_to_hca script encounters an error and does not work when running for this [project](https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE137720)
**To Reproduce**
Steps …
Wkt8 updated
7 months ago