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Hi,
I have tried to run the **tutorial dataset (SARS-CoV-2)** with the command mentioned on the webpage,
https://cbg-ethz.github.io/V-pipe/tutorial/sars-cov2/
However, after running successfu…
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Hello,
I'd like to make a custom transcriptome but this section appears to be missing on github.
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[GLIMPSE2] Ligate multiple output files into chromosome-wide files
* Authors : Simone RUBINACCI & Olivier DELANEAU, University of Lausanne
* Contact : simone.rubinacci@…
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Hi dear,
firstly thank you for providing Deepsignal. I am wondering how can ı visualize the output of Deepsignal? could you offer any package or guideline in order to visualize the output data? Als…
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Hi all,
What's the easiest way for me to go from a existing multiple sequence alignment FASTA to a graph, for analysis in VG?
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What does the option `--max-memory` do?
I am getting Killed signal because of out of memory but I already set this option so it seems it's not working.
`python /phasebook/scripts/phasebook.py -i…
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Hello everyone, especially hg38 reference genome users!
Now bcbio has hg38 support for almost 5 years!
http://bcb.io/2015/09/17/hg38-validation/
However, many user were still on GRCh37/hg19, be…
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Hi @aganezov,
I'm trying to merge two assemblies resulted from different settings with Supernova. Since I have fasta file I think I have to convert them in point formatted file by running `fasta2ca…
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Dear author
Thank you for your outstanding contribution for this program . I have some questions I'd like to ask you, if it's convenient for you.
When I run the sample data with
` python /home…
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Following [x.com/@fiamh](https://x.com/fiamh/status/1782261875876692322) I was made aware of the proposal for how to store modified base information in VCF files.
A quick search and I could not fin…
cjw85 updated
3 months ago