-
**KS.1(JN.1.13.1.1)>**S:R190S**(G22132T)
Query:`T22928C,G22132T,C26894T,C25680T,-G28001T,-C19716T,-T14541C,-C344T,-C6555T,-C6310T,-A1674C,-T1978C ,` (edited on September 12)
Samples: 24
Countries: …
-
**Defining Mutations:** `LB.1` > `G8083A(ORF1a:M2606I), C22281T(S:T240I), C22995G(S:T478R)`
**Query:** `G8083A, C22281T, C22995G`
**Earliest seq:** 24-05-24 (`EPI_ISL_19188794`, Texas, USA)
**Lates…
-
## Branch 1: JN.1.4.5+S:S31F, R346T, F456L on C28948T branch
JN.1.4.5> C28948T> C21654T(S:S31F), G22599C(S:R346T), T22928C(S:F456L)
It's placed on a JN.1.4> C5284T> T22928C> G22599C> T5284Crev branc…
-
It seems another KP.3.1.1+S:R346T branch is emerging
KP.3.1.1+A29716T+G22599C(S:R346T)
GISAID query: A29716T, G22599C, C23039G
No. of seqs: 7(South Korea 1 USA 6)
First: EPI_ISL_19412137, US…
-
KP.2.6+C24106T+C28528T,C22716T(S:T385I)
GISAID query: C24106T,C22716T,C28528T
No. of seqs: 12(Chile 1 USA 1 Ireland 1 Spain 1 UK 8)
First: EPI_ISL_19216707, 2024-6-6, UK
Latest: EPI_ISL_193907…
-
Hawaii is experiencing a surge in cases, with KP.3 at 30% of samples collected after May 15 it is very likely that it is the main driver of this new wave.
About 1/3 of KP.3 samples belong to a local …
-
What is going on here? )
```
sh-5.1# port -v install gcc12 configure.compiler=clang
Warning: configured user/group macports does not exist, will build as root
---> Computing dependencies for gc…
-
A new LB.1.3 sublineage recently emerged carrying S:P217H
LB.1.3> ORF1a:E381D(G1408T), S:P217H (C22212A)
Query: C18131T,C22212A,del21653
Samples: 8
Countries: 2
IDs:EPI_ISL_19153984, EPI_ISL_1…
-
![image](https://github.com/user-attachments/assets/2a92ad3d-b33f-4d60-86d8-1417ff4fcf61)
![image](https://github.com/user-attachments/assets/9da107d9-0633-4c08-9888-e13693b1b6af)
tree: https://next…
-
![image](https://github.com/user-attachments/assets/73793efc-2ec5-4e8a-8d9b-0106c0faa783)
tree: https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_2d95f_c909b0.json?f_userOr…