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Dear Sabrina, @SabrinaRichter
Thanks for your research and your contribution to the single-cell proteomic data. I am very interested in the data mentioned in your article. I am a PhD student and I …
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Hi there,
when I tried to add controlled vocabularies to the parameters of protocols in my **Investigation** file, the validator gave me the following error: `Problem while mapping the class 'Protocol…
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- [ ] [Correlated gene modules uncovered by high-precision single-cell transcriptomics](https://www.pnas.org/doi/abs/10.1073/pnas.2206938119)
- [x] [Dynamics of single-cell protein covariation during…
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Hi @Jhsmit
Are you happy for me to port the datasets to an equivalent R repository as they appear? We will store them as as special mass spectrometry object there.
I assume you're not planning …
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Hi,
I am using OpenMS component to analyze protein mass spectrometry, at some steps I always encounter the following report:
`QIODevice::read (QNetworkReplyHttpImpl): device not open`
For example i…
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We can try to do this based on the publications in GlyGen and the same PMID in Pride or MassIVE. As a first step @jeet-vora will check with @pkay47 if UniProt already has this.
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I am putting this comment here, but it also impacts the examples for mmvec (and maybe other programs).
The 'red sea' example for songbird uses sampleid as an identifier for the sequence data (feat…
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We have a notation “ICPMS” but then another one as “MC-ICP-MS”. Should the first also read “ICP-MS”?
mk618 updated
4 months ago
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I received a small grant to support experimental, biochemical testing of potential targets for Series 3 (#549) through partnerships with the wonderful core labs (NMR, mass spectrometry, X-ray crystall…
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In your manuscript entitled "Triqler for Protein Summarization of Data from Data-Independent Acquisition Mass Spectrometry" you state that:
"The pipeline generated decoys for FDR calculations, whic…