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https://en.wikipedia.org/wiki/Periphyton
_ a mass of biological material consisting of algae, cyanobacteria, heterotrophic microbes, and detritus that is attached to submerged surfaces in most aqua…
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In several cases when we have microbes that are associated to specific hosts...they should be displayed. Since an entity that is on one host is different than the the other but can be called the same…
hdliv updated
8 years ago
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I used Kraken2+Bracken to quantify the composition of microbes in my metagenomic data with pre-build database (PlusPF). However, I found there are more than 1000+ reads were assigned to species A. Aft…
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For me the tool "get microbial data" lacks some functionality and might need some improvements or to be replaced:
- selection of multiple species or taxa should let the tool download all data for t…
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# Critical Assesment of Metagenome Interpretation (CAMI)
CAMI is an open challenge for meta-omic's programs where the developers of said programs test out their programs on multiple different dataset…
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Hello! I saw your recent preprint, "Scalable estimation of microbial co-occurrence networks with Variational Autoencoders" and I'm hopeful your method may solve my issues, but I wanted to touch base t…
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We are working on database holding microbes and their genes data. See:
http://microbiome.org/
The Mixs standards were used on guiding data collection and ENVO terms were used in data annotation. W…
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### Working with multidimensional data
We'd like to compute and visualize the global flux of "soil heterotrophic respiration"--the CO2 produced by microbes in the soil. This will involve reading in…
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### Il semblerait que dans l'algorithme de Beltoforion il ne peut pas il y avoir plusieurs nourritures sur la même case.
![image](https://github.com/SchArthur/evolution/assets/147597064/4e793bf7-d196…
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Dear GRiD Developers,
I'm getting the following error when I am running Grid Multiplex on the mice metagenomic data (from stool) using comprehensive GRiD database. However, I able to receive the ou…