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@ljcohen has some code, maybe... :)
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Continuing the work on https://github.com/geneontology/go-ontology/issues/23424 (Membrane terms obsoletion: integral component of membrane), annotations to the 'extrinsic component of membrane' terms …
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Related to NCBI Taxonomy / Accession - names in Genbank are sometimes outdates and may not "corrected" over time - Asellia tridens haplotype DF1 cytochrome b (cytb) gene, complete cds; mitochondri…
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CONSERVED UNKNOWN CHANGES
410
Although these were in "conserved unknown" they had an existing process annotation and so they were not in the Open Biology unknown list:
- [x] SPBC9B6.03 endosomal …
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https://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0030150
GO:0030150 protein import into mitochondrial matrix
is currently a child of
GO:0006626 protein targeting to mitochondrion
This is a true…
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Hi Remi,
I was wondering how mitochondrial-genomes specific is MitoFinder ?
Do you think it would work on Wolbachia for instance ? To me it looks like it should, given a set of Wolbachia genes in…
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I noticed that there are some other SO term annotated that have residues. Should any of these feature be included in the feature viewer? (Show details to see the residues)
- https://www.pombase…
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MAR04280 (pyruvate[m] + NADH[m] lactate[m] + NAD+[m]) should be removed, because [having any significant amount of LDH activity in the mitochondrial matrix would rapidly dissipate the mitochondrial m…
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This is a quick fix but users should know that when doing any kind of multiome analysis, `addGeneExpressionMatrix()` is not accurately calculating `Gex_MitoRatio`. There are two sources of error here …
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Dear Pauline,
I have been trying to use make-SIFT-db-all.pl to create a database. It all seems to be going well, and files are being created in the directories singleRecords, fasta and subst (the …