-
Hi all,
In an earlier version of TractSeg, one of the program outputs was a **FA_MNI_isoxfm.nii** (88 x 106 x 88, voxel size 2.04 isotropic) that matched voxel dimensions of bundle segmentations.
…
-
Given that this paper is about comparing coils, an obvious question when interpreting B1+ and B1- results is: how are the Tx and Rx coils distributed for each coil? We should gather this information f…
-
https://github.com/FCP-INDI/C-PAC/blob/63c66c3b1d5e3f662ce2ffb521598364805156e4/CPAC/pipeline/cpac_pipeline.py#L2434
When writing functional data to MNI space, if a linear anat-MNI transform was ca…
-
- [x] show_retinotopy_flatmap.py
- [x] show_retinotopy_webgl.py
- [ ] show_mni_flatmap.py
- [ ] show_mni_webgl.py
- [x] show_config.py (add to __repr__ for cortex module?)
-
I work with fmri BOLD data of a brain slab and currently encounter problems when I calculate GLMs in SPM after I have warped them into mni space using ANTs.
The warping works fine and the output l…
-
currently loading with black background through nilearn's API.
-
**What's the problem this feature will solve?**
Annotation saved using CellLocator do not include reference to the associated atlas. Without the context, interpreting the saved annotation is not po…
-
**Description**
The size of the installer (843MB vs 215MB) is partially explained by the fact the MNI atlas is now shipped with the application. We noticed that the install rules were installing th…
-
According to dtiInit, t1 can be an optional input file
```
% twFileName = T1-weighted anatomical image. By default the diffusion
% data are aligned to this image. You can, …
-
**Is your feature request related to a problem?**
To apply a concatenated sequence of transforms to each volume in a 4D series (for example, head motion + susceptibility warp + coregistration), eit…