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Hello!
How to install OpenMS in macOS Monterey version 12.5.1. I tried different ways but it shows that my device is incompatible.
CM-07 updated
7 months ago
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Hi there,
I am trying to replicate an analysis that some collaborators did with MaxQuant and (presumably, internally) Andromeda, using SearchGUI and PeptideShaker. This is because the GUI interfac…
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Hello, I get this error trying to run the linux command line version of DiaNN. I'm running Ubuntu 22.04 inside a Docker with 64 cores and 64 GB RAM. As a note, this same raw file and configuration run…
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## Description
A series of DataSets to work with [LC-MS and GC-MS](https://en.wikipedia.org/wiki/Mass_spectrometry) data using the pyOpenMS library.
## Context
In the world of biology related ana…
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Hi
I'm trying to use patRoon to analyze my own data (~3GB mzML) following the tutorial and met some problems.
1) When running the **generateFormulas()** command,
`formulas
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I would like to run IonQuant from command-line and without the use of FragPipe. From what I understand, it should be possible, but it requires the "ext" folder of MSFragger — I do have the latter, but…
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Hello,
I am running Fragpipe using the command line in Linux. We are implementing a HLA workflow for both, DIA and DDA data and we have thousands of injections. Exceptionally, we have seen that we ha…
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Is still experimental and the following issues need to be resolved:
- [x] **Allow consuming merged IDs**, if you want to perform e.g. Percolator across fractions. Think about including rescoring into…
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### Basic information
* My operating system and version: MacOC Ventura 13.3.1
* My MZmine version: 3.4.27
### What happened
Software was working successfully, but after trying to submit a ba…
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Hi, I'm working with the `CometAdapter` and I have some issues. When I search a light file with some variable modifications it works fine. But when I use a quite big file (for instance a 2.2GB mzML) a…