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Nesvilab
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IonQuant
A label free quantification tool.
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15
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Quantifying peptide modifications on top of fixed modifications (mass-offset search)
#55
tjlundgren
opened
3 weeks ago
3
got an out-of-memory error when running IonQuant
#54
huiyinc
opened
1 month ago
2
Error when trying to download/update IonQuant [2.0] on Fragpipe
#53
lxavierneves
closed
1 month ago
3
Enhancement/Feature request/IonQuant - Export peptide isotope intensities
#52
jatin-burniston
opened
3 months ago
0
Estimation of RAM consumption by IonQuant
#51
StephanEckert
closed
2 months ago
1
Enhancement/Feature request for MBR - Which Donor Run was used
#50
1Moe
opened
6 months ago
0
SILAC channel intensity instead of only ratio
#48
JonasAlbinus
closed
1 month ago
10
Input file requirements
#47
patrick-willems
closed
8 months ago
1
MBR Crash
#46
ChampionLab
closed
8 months ago
12
IonQuant from mzIdent files
#45
JB91451
closed
12 months ago
1
IonQuant fail to load mzML files
#44
assafkacen1
closed
1 year ago
3
mzML input from Bruker timsTOF data
#43
andzajan
closed
1 year ago
7
Feature request: Do not match ions with different CV when processing FAIMS data
#42
hollenstein
closed
1 year ago
6
Can MSFragger perform protein grouping for multiple enzymatic digest?
#41
TeckYewLow
closed
1 year ago
2
Can Ion Quant perform LCF-MBR on fractionated samples? or only for single LC-MS runs?
#39
TeckYewLow
closed
1 year ago
14
about Ionquant normalinzation
#38
juseonmin
closed
1 year ago
6
Bruker datasets (not timsTOF) fail
#37
p-bell
closed
1 year ago
3
Fractionated Silac Error in V19.0
#35
Skourtis
closed
1 year ago
6
There are only 4 negative data points in training. We need at least 10
#33
stratei86
closed
2 years ago
2
neucode silac?
#32
rpm78
closed
2 months ago
0
Heavy light Intensities
#30
Skourtis
closed
2 years ago
1
[log_2022-02-04_02-53-09.txt](https://github.com/Nesvilab/FragPipe/files/8000752/log_2022-02-04_02-53-09.txt)
#29
ihorrible
closed
2 years ago
1
Install error
#28
panbei2022
closed
2 years ago
3
Updating Philosopher's Tables java.lang.NullPointerException
#25
tjlundgren
closed
2 years ago
4
does MBR ions part of the protein \ peptide summary table?
#24
merbllab
closed
2 years ago
1
MBR halting error
#23
m-a-valach
closed
2 years ago
4
Update page theme
#22
sarah-haynes
closed
2 years ago
0
Tutorials
#21
IgorFesenko
closed
3 years ago
1
How to annotate spectra to experiment and replicate?
#20
comcon1
closed
3 years ago
1
Missing intensities and incorrect 'combined' compilation
#19
m-a-valach
closed
3 years ago
12
IonQuant returns ambiguous error with our pepxml file
#18
kiahalespractice
closed
3 years ago
2
Generate MSStats.csv report from IonQuant without using FragPipe
#17
avera1988
closed
3 years ago
3
Java NumberFormatException on MS1 Quant
#16
BrendonSeale
closed
3 years ago
5
N14/N15 labeling
#15
without1102
closed
3 years ago
1
IonQuant with iProphet results?
#14
oliverschilling
closed
3 years ago
4
Questions about LFQ Match between runs
#13
algom
closed
3 years ago
1
IonQuant filtering: Protein not found in psm.tsv
#12
grosenberger
closed
3 years ago
6
IonQuant never completes mixture model generation
#11
jgriss
closed
3 years ago
4
Stand-alone IonQuant
#10
m-a-valach
closed
3 years ago
12
Single Replicate Quant Issue
#9
enonimos
closed
3 years ago
4
Silac quantitation
#8
algom
closed
3 years ago
4
Memory Issue
#7
Hyggern
closed
4 years ago
1
Failure in MBR with timsTOF ddaPASEF data
#6
ogtkk
closed
4 years ago
9
semi-enzymatic PSMs
#5
tobiasko
closed
2 months ago
2
IonQuant parameters
#4
tobiasko
closed
4 years ago
9
Accuracy
#3
tobiasko
closed
4 years ago
20
multithreading
#2
tobiasko
closed
4 years ago
22
Identification-free diaPASEF quantification
#1
swillems
closed
4 years ago
4