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## Bug Report
#### Current Behavior
When I install a software, scoop will create a RunAsAdmin folder in the current working directory to save the cache. Why?
The command I executed when ins…
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Hello,
Thank you very much for your excellent library. I have a tiny issue with it - there is a case where DTOs are defined in a separate artifact, which we cannot annotate with @JsonCompile as we …
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Hi all, I got an interesting and unexpected error.
Unfortunately, I can not retrieve the bam file to see what it is about:
```bash
samtools sort: failed to read header from "-"
```
the log:
```b…
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## Describe your idea for a new feature
The build-in SISTR pipeline has a REST API endpoint for accessing results `analysis/sistr`, but the plugin version of this pipeline does not have such an endpo…
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Hello!
I just had a quick question. Looking through the documentation I am a little unclear if knock-knock can be used to analyze CRISPR NGS data generated using multiplexed PCR (e.g. multiple ampl…
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Hello,
I would like to try out diffReps on some ChIP-seq data that I have recently analyzed by MACS2. Could you please add the relevant genome files for this? sacCer3 is the most updated one.
Thank …
mayre updated
9 years ago
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**Is your feature request related to a problem? Please describe.**
We need to create a minimal germline variant calling pipeline use case setup here
- https://github.com/bihealth/snappy-use-case-g…
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It took 3hours to generate 10GB NGS data (19GB total) on my laptop (4 cores)
- How many samples do we require to make it statistically correct?
- We are interested in host-contamination impa…
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> Next-generation sequencing (NGS) technologies have enabled affordable sequencing of billions of short DNA fragments at high throughput, paving the way for population-scale genomics. Genomics data an…
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Hello,
I'm testing gatk4.3 against 3 WES samples. For less time comsuption, I scattered the bed file into 45 small interval list. But an error prompted out in the GermlineCNVCaller step with the er…