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**- Upload your log file**
(If a log file hasn't been generated, go to the 'Run' tab in FragPipe, click 'Export Log', zip the resulting "log_[date_time].txt" file to avoid truncation, then attach the…
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### Description of feature
An idea for downstream visualisation of comparison between conditions:
Waterfall plot of unique peptides between 2 conditions, with overlapping peptides (non unique). …
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Hi Vadim,
I am trying to predict a library with a given input tsv to produce a predicted.bin with the newest DIA-NN. I get the following error on Windows and Linux machines as of version 1.9.1. Ver…
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Hi HiTMaP team,
Currently I have been running through your mouse brain example data. However, I encountered an error:
## Codes I used:
```
fastafile
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**Steps to Reproduce**
1. Switch to Macro
2. Open file [rna-chain-connected-to-peptide-chain.zip](https://github.com/epam/ketcher/files/14614226/rna-chain-connected-to-peptide-chain.zip)
3. Press '…
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Hello I noticed that when you search for a peptide there are issues with the filter options. I tried to search for a particular mass and it comes up with 306 matches for example. This number does no…
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Is that possible to support denovo peptide sequencing using tool like Casanovo in koina?
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We want some filtering capabilities for peptide characteristics.
From Rui:
- Peptides identified in DIA data
- Filter out those peptides that contain Cysteine
- Filter out those peptides that co…
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"chr_id","chr_start_pos","chr_end_pos","ref_nt","alt_nt","ensembl_transcript_id","ensembl_peptide_id","uniprotkb_canonical_ac","refseq_ac","uniprotkb_aa_pos","refseq_aa_pos","ref_aa","alt_aa"
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Dear author, thank you very much for your contribution！
Now I would like to use the model you have trained to predict whether my peptide can cross the blood-brain barrier. What should I do？