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Hi,
I've tried MOFA with several datatypes, some having ~50 samples while others have 15 or 22 samples.
Here's an overview of the data:
![image](https://user-images.githubusercontent.com/2590…
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Hello,
I am trying your package and I have a question about the estimation of n.sv.
I see you recommend to calculate the n.sv on the y Y.r matrix of residuals after regression of the known confoun…
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I installed all the tools on a clean galaxy instance based on all the workflows (`workflow-to-tools` + `shed-tools install`) + installed all the workflows itself and went trough all them manually, rev…
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The suggestion of changing output of assay from 'information content entity' to 'data item' is the result of assay harmony task.
In total 181 OBI assay terms, 133 have logical definitions to fit t…
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Is it possible to use TOAST for microarray data? Are there modifications or specifications that should be used when analyzing microarrays?
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Hello,
Thanks for this very helpful package. I have a question regarding accessing the subtype information associated with TCGA projects (in this example, specifically `COAD` but my question applie…
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There is several tutorials that would need some ❤️
Most of the changes are newcomer-friendly 😄
We created a checklist of the possible contributions on the tutorials: https://galaxyproject.github…
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Preferred Term: single-nucleus methylcytosine and transcriptome sequencing assay
Synonyms: snmCT-seq
Definition: A multiomic method to measure the cytosine DNA methylation and gene expression signat…
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Hello,
I have recently become aware of this excellent study group for R, with applications to biological data analysis and more generic data science problems.
At the BC Children's Hospital Resear…
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Initial group info you provided:
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| Name | Department/Program | Expertise/Interests |GitHub ID |
| ------------- | ------------- | ------------- | ------------- |
| Samantha Sch…