-
hi, do you have the example file for phenotype and mapping file? Thanks
-
Hi,
Thanks for this wonderful tool!
I am running a genetic correlation between brain volume (**C256_55**) and AD. I obtained very low h2 estimates for this brain volume (I ran GWAS with) and al…
-
There is likely an error in `MED.py` causing certain medication codes to be skipped. See issue #4. Data can be found at `$OAK/users/magu/repos/rivas-lab/in_old_not_tools.txt`
-
I see the library expects the ukb phenotype files as .csv (PHENOTYPE_DATASET_CSV_FILE_PATH). Does the library also support the .tab files (R files)?
-
Hi there!
Really interesting work, thank you especially for open-sourcing the code. We're trying to use the pre-processed list of variants to validate a similar method, but I wanted to check how it…
-
Hi,
I am comparing different PRS methods as part of a larger project in different biobanks.
We are trying to come to a common set of reference SNPs to use, and wanted to start by using the HapM…
-
So far we've been using Projector inside of Jupyter notebookes. This can be run stand-alone:
https://projector.tensorflow.org/
That is similar ManyHands/hypermap#6 in that it all runs in the cl…
-
Hi, I am very interested in your paper. Could you kindly provide the processed data used in your paper?
-
Hello!
I am running emmax gene-based CMC test on the sample 47,000 participants. The input vcf file includes 1824 variants. The number of individuals is the same kinship, vcf and ped file. However…
-
Hi Phil,
First and foremost, thank you for this important contribution in making self-reported data less troublesome.
I have tried to run the code below, but find it really difficult to understan…